Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928734.1_cds_XP_016476254.1_68100
CDS Infomation

[gene=LOC107797843] [db_xref=GeneID:107797843] [protein=probable serine/threonine-protein kinase WNK4] [protein_id=XP_016476254.1] [location=join(73304..73453,75482..75519,75672..75899,75988..76208,76342..76499,76584..76977,77395..78237,78334..78470)] [gbkey=CDS]
Sequence

ATGATTTCCGGGGCTGGAATTGGAATTGGGAATGGGGACCCTTTAGGATGTTGTACAAAT
AACAAAGGCGGATCTAATGGATGGACTAATGAAGCACACTACTTGCAAAATGACTACGTT
GAGAAAGACCCCAATGGTCGATATGTTCGGTATAATGAAGTATTGGGCAAGGGAGCATTC
AAGACTGTCTATAAGGCATTTGACTTACTTGAGGGAACTGAAGTTGCATGGAGCCGAGTG
AAAATCGATGATGTGTTGCTGTCACCAGAAAGTTTGGGAAAATTATATTCAGAGGTTCAT
CTTCTGAGACAGTTGAAACATGAAAATATAATGAAGTTATATGATTCATGGATTGATGAC
AAGAAGAGGACAGTTAACATGATCACCGAGCTCTTCACATCCGGGAACTTGAGACGATAC
CGTAAGAAGTATCAAAGTGTCGATATGAAGGCTATAAAGAATTGGGGAAGGCAGGTTCTC
CAAGGTTTGGACTATCTCCATAGTCAGAACCCGCCTATAATTCACAGGGACTTGAAATGC
GACAATATTTTTGTCAATGGAAATCATGGGGAAATCAAGATTGGGGACCTTGGATTGGCG
ACGATTATGGAGCAGCGTACTGCCAAGAGTGTTATTGGGACCCCCGAATTTATGGCCCCA
GAGCTCTACGAAGAAGAGTATAATGAACTAGTGGATATATATTCCTTCGGAATGTGTATG
CTGGAAATGGTAACTTTTGAGTACCCTTACAGCGAGTGCAAGAATCCTGCTCAAATTTAC
AAGAAAGTTAGCTCAGGCATTAAACCTGCTTCCCTCGGCAAGGTTACTGATTCTGAAGTC
AAAGGATTCATCGAAAAATGTTTGGTTGTAGCATCCGAGAGGTTGTCAGCCAAGGAACTC
CTGAAAGACCCGTTTCTTCAATGTGAAAACTTGAAGGAGTCGGTCCATAATCCATTTCAG
TTACCTAAACAATGTCCTAAATCTTTGAGTTTGTCGAAACCTTTGCCACATTCCATGGAT
GTGGATTCAGAGTATAACCAATCTATGTGTACAGACTCTAATTGTGGAAGTCCTCGTGTT
CCGGTTTTGGAATTCCAGAGATGTCATCAGAACAATGAATTTAAATTAATGGGGAAGAAG
AATGACGATAACTCAATTTCATTGACCTTTCGAATCAGAGATCCTGCTGGTAGTATAAGA
AATATACACTTCATTTTCTATCTTGATACAGACACTGCACCTTTAGTTGCGGCAGAGATG
GTTGAACAACTGCAGCTAGCTGATCATGACGTAGCTTTTATTGCTGACTTTATTGATTAC
CTAATAATGAAGATATTTCCAGCTTGGAATCCTTCCTCTGGAGACCATTCTAGCGGAGGG
AGAAGTCCAAGCAAACAACTGCGAGAAAGTTGCCTAACAGACTTGACCGGTTGCTCGAAC
AAGTCCATAGGTCACCAAGATGTTATTTCTGACTTCAATGTGGAAACTCATGTAATTGCT
CGAACTAATGAAGGTGATATGTATGTGAATTCAGATGGCACTTCTCATCATGTTACATTT
GATTCGCCAACGCATTTGGTGCCCGTTGATGATGAAAAGTCTCAAGGATCAGTTGTTTCT
AAGATTACGACTGCAAATGCTGATATTAGGAATGAGAATTCGTTTGGATGCTTCGACGAT
CATGTTAATGATGGAGTTTCTAAAAGTTGTAGTACAAGCATCTCGGAGATGGATTTCAGG
TACTTGTTCCACGACGAATGCACAATGCAGGAAAACGATGATGATACATTAAATGAATAT
GGGAAGGATTCAGAGCTGACTTATATAGATATCGACAGAATTTCTAGAGGCATGAGCTTG
TCGAGTAGTTCTTTTTCCTCCTTGGTTGACAAAGATGAGGATACAGAGCTAAAATTGGAG
CTCAAAGCAATTGAATTGCAGTATCAGGAGTGGTTTCAAGAACTCTCAAGAATGAAGGAA
GAGGAACTAGAAACTTGCACGAAGCGATGGACGACTAAGAAAAAGTTGGCAGAAGGTCAC
GGGTTCAAGCCGCGGAAACAGTCTATTGCAGAAATGCAGGGTACGGCTGCATATATTAAA
CCCTTTGCGCTTAGCGGGAGTTTAGTGCACCGGACTGCCCTTCTTGCTATGCGTAACTTT
ATAACTTGA

Peptide Sequence

PEP ID

XP_016476254.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase WNK4 [Nicotiana tabacum]
Sequence

MISGAGIGIGNGDPLGCCTNNKGGSNGWTNEAHYLQNDYVEKDPNGRYVRYNEVLGKGAF
KTVYKAFDLLEGTEVAWSRVKIDDVLLSPESLGKLYSEVHLLRQLKHENIMKLYDSWIDD
KKRTVNMITELFTSGNLRRYRKKYQSVDMKAIKNWGRQVLQGLDYLHSQNPPIIHRDLKC
DNIFVNGNHGEIKIGDLGLATIMEQRTAKSVIGTPEFMAPELYEEEYNELVDIYSFGMCM
LEMVTFEYPYSECKNPAQIYKKVSSGIKPASLGKVTDSEVKGFIEKCLVVASERLSAKEL
LKDPFLQCENLKESVHNPFQLPKQCPKSLSLSKPLPHSMDVDSEYNQSMCTDSNCGSPRV
PVLEFQRCHQNNEFKLMGKKNDDNSISLTFRIRDPAGSIRNIHFIFYLDTDTAPLVAAEM
VEQLQLADHDVAFIADFIDYLIMKIFPAWNPSSGDHSSGGRSPSKQLRESCLTDLTGCSN
KSIGHQDVISDFNVETHVIARTNEGDMYVNSDGTSHHVTFDSPTHLVPVDDEKSQGSVVS
KITTANADIRNENSFGCFDDHVNDGVSKSCSTSISEMDFRYLFHDECTMQENDDDTLNEY
GKDSELTYIDIDRISRGMSLSSSSFSSLVDKDEDTELKLELKAIELQYQEWFQELSRMKE
EELETCTKRWTTKKKLAEGHGFKPRKQSIAEMQGTAAYIKPFALSGSLVHRTALLAMRNF
IT

Transcript Sequence

Gene sequence data has not been registered.